CLUSTAL W and CLUSTAL X Multiple Sequence Alignment Programs (version 2.0, 26 November 2007) Contact email address: clustalw@ucd.ie For details and citation purposes see paper "Clustal W and Clustal X version 2.0", Larkin M., et al. Bioinformatics 2007 23(21):2947-2948 http://bioinformatics.oxfordjournals.org/cgi/content/full/23/21/2947 Clustal X provides a window-based user interface to the ClustalW multiple alignment program. This directory contains the files: clustalw-linux-i386-2.0.tar.gz - a compressed tar file with a linux binary for ClustalW (Debian/Ubuntu) clustalw-linux-src-2.0.tar.gz - a compressed tar file with source code for Clustalw for linux clustalw-mac-universal-2.0.tgz - a compressed tar file with a Mac universal binary clustalw-windows-xp-2.0.zip - a compressed Windows XP archive clustalw-windows-xp-src.tar.gz - a compressed tar file containing the source code for ClustalW for windows clustalx-linux-i386-2.0.tar.gz - a compressed tar file with the linux binary for ClustalX (Debian/Ubuntu) clustalx-linux-rhel3-libcppstatic-i386-2.0.tgz - a compressed tar file with the linux binary for ClustalX (Red Hat Enterprise edition 3 using the XFree X-windows libraries) clustalx-mac-universal-2.0.dmg - a disk image for the Mac universal binary for ClustalX clustalx-windows-xp-2.0.zip - a compressed Windows XP archive with the PC binary for ClustalX clustalx-src-2.0.zip - a compressed tar file with the source code for ClustalX (All platforms - requires Qt GUI framework from Trolltech to compile) Supported systems ---------------------------------------------------------- Windows XP Mac OSX 10.3.9 or higher Linux (debian and red hat binaries) We have successfully run the binaries on: Ubuntu 6.10 Edge Eft Red Hat Enterprise Edition 3.0 Debian 4.0 testing Contributed binaries ---------------------------------------------------------- For operating systems that we cannot support ourselves we try to maintain a collection of binaries that have been compiled by other users. These can be found in the sub-directory "contributed" Acknowledgements ---------------------------------------------------------- Science Foundation Ireland who provided the funding which enabled the development of Clustal2.0 Bug Tracking ---------------------------------------------------------- We track bugs in Clustal in a publicly viewable bugzilla instance. You can find it at: http://bioinformatics.ucd.ie/bugzilla If users find a bug or have issues running clustal2.0 they should contact the development team at clustalw@ucd.ie Known issues ---------------------------------------------------------- 1. ClustalX2.0 doesn't run on Mac OSX 10.3.8 or lower Resolution: upgrade Mac OS to OSX 10.3.9 or better Next Release ---------------------------------------------------------- The next release 2.0.1 is scheduled for 29th January 2008